The detailed information of tRNA gene sequence


Sequence ID>WENV170015017
Genome IDAZIC01017669
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 266
End posion on genome 190
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgaaattatt
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGTTAGAGCGTCTGCTTGTCACGCAGAAGGTCGCGCGTTCGAG
TCGCGTCGTCCCCGCCA
Downstream region at tRNA end position 
agaaaaaaac
Secondary structure (Cloverleaf model)
>WENV170015017	Asp	GTC
                   t      GCCA agaaaaaaac
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G C G C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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