The detailed information of tRNA gene sequence


Sequence ID>WENV170015023
Genome IDAZIC01018087
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 891
End posion on genome 818
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aataatttat
tRNA gene sequence 
TCGGGGATCGTCTAATGGTAGGACACCTGGTTTTGGTCCAGGCAATCGGGGTTCGAATCC
CTGTCCCCGAGCAA
Downstream region at tRNA end position 
tttagtgcta
Secondary structure (Cloverleaf model)
>WENV170015023	Gln	TTG
                   t      GCAA tttagtgcta
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
        A A        C      | + | | |     G
      T     T C T G       C G G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     CAAT
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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