The detailed information of tRNA gene sequence


Sequence ID>WENV170015033
Genome IDAZIC01018778
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1395
End posion on genome 1467
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtttataatc
tRNA gene sequence 
GCCTGTTTAGCTTAATTGGTAAAGTATACTGCTCATGACAGTAATTATAAAAGTTCAAGT
CTTTTGATAGGTAagt
Downstream region at tRNA end position 
agtaaatgga
Secondary structure (Cloverleaf model)
>WENV170015033	Met	CAT
                   c      Aagt agtaaatgga
                     G + T
                     C - G
                     C - G
                     T - A
                     G + T
                     T - A
                     T + G          T G
                    T     T T T T C     A
      T A A        A      | | | | |     A
    T       T T C G       A A A A G     C
    G       | | | +                 T T
    G       A A G T
      T A          A     ATTAT
                    T - A
                    A - T
                    C - G
                    T - A
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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