The detailed information of tRNA gene sequence


Sequence ID>WENV170015035
Genome IDAZIC01018778
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1579
End posion on genome 1660
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tatatctcta
tRNA gene sequence 
GTCCGAGTGATGAAATTGGAAAACATGACAAATTTAAAATTTGTTGACGAAAGTCTTAAA
GGTTCAAGTCCTTTTTCGGACAtac
Downstream region at tRNA end position 
atttataata
Secondary structure (Cloverleaf model)
>WENV170015035	Leu	TAA
                   a      Atac atttataata
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     G + T          T G
                    T     T T T C C     A
      T A A        G      | | | | |     A
    T       A G T A       A A A G G     C
    G         | | |                 T T
    G       A C A T
      A A A        G     TGACGAAAGTCTT
                    A - T
                    C - G
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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