The detailed information of tRNA gene sequence


Sequence ID>WENV170015044
Genome IDAZIC01019189
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 2030
End posion on genome 2108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctcctttc
tRNA gene sequence 
ATCGCGGTAGGGGAGTCTGGTCGTCCCCGCAACGCTCATAACGTTGAGATCGTCGGTTCA
AATCCGACCCGCGTCACCA
Downstream region at tRNA end position 
aggggaggta
Secondary structure (Cloverleaf model)
>WENV170015044	Met	CAT
                   c      ACCA aggggaggta
                     A   C
                     T   T
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A G C C     A
    C T G A        A      | | | | |     A
  T         G G G G       G T C G G     C
  G         | | | |                 T T
  G         C C C C
    T C G T        G     AGATC
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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