The detailed information of tRNA gene sequence


Sequence ID>WENV170015048
Genome IDAZIC01019588
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 2082
End posion on genome 2171
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ttttagtatt
tRNA gene sequence
GGAGAGGTCGCATAGTGGCTTAGTGCGCCACCTTGGAAAGGTGGTAGGTTGTAAAAGGCC
TCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position
attttaaatt
Secondary structure (Cloverleaf model)
>WENV170015048	Ser	GGA
                   t      GCCA attttaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    C       G T G C
      T T A        G     TAGGTTGTAAAAGGCCTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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