The detailed information of tRNA gene sequence


Sequence ID>WENV170015049
Genome IDAZIC01019736
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 614
End posion on genome 540
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggatcactca
tRNA gene sequence 
GCCCCCGTAGCTCAGTTGGATAGAGCAATGCTTTCCTAAAGCATAGGTCGCAGGTTCGAA
CCCTGCCGGGGGTGCtt
Downstream region at tRNA end position 
aatctcacga
Secondary structure (Cloverleaf model)
>WENV170015049	Arg	CCT
                   a      GCtt aatctcacga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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