The detailed information of tRNA gene sequence


Sequence ID>WENV170015065
Genome IDAZID01000719
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 192
End posion on genome 116
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcaaatttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCCCAGGTTCGAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
cttcactccg
Secondary structure (Cloverleaf model)
>WENV170015065	Met	CAT
                   c      ACCA cttcactccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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