The detailed information of tRNA gene sequence


Sequence ID>ENV08001962
Genome IDABOK01102310
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 78
End posion on genome 2
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aatgcaaatt
tRNA gene sequence 
CTGCCCGTAGCTCAGTTGGATAGAGCATCGGCCTTCTAAGCCGAGGGTCGGGGGTTCGAA
CCCCTCCGGGCAGGCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001962	Arg	TCT
                   t      GCCA annnnnnnnn
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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