The detailed information of tRNA gene sequence


Sequence ID>WENV170015075
Genome IDAZID01001763
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 471
End posion on genome 396
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caagcccgct
tRNA gene sequence 
GGGGCAGTAGCTCAGCTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTCGTCGGTTCGAGC
CCGATCTGCTCCACCA
Downstream region at tRNA end position 
ttgccgggtg
Secondary structure (Cloverleaf model)
>WENV170015075	Ala	TGC
                   t      ACCA ttgccgggtg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     T A G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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