The detailed information of tRNA gene sequence


Sequence ID>WENV170015114
Genome IDAZID01014157
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 870
End posion on genome 794
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
ccaggcacaT
tRNA gene sequence
GCCCCCGTAGCTCAGAGGACAGAGCAGGAGCCTTCTAAGCTCTTGGTCGGGGGTTCGAAT
CCTCCCGGGGGCGCCC
Downstream region at tRNA end position
gccggtccgc
Secondary structure (Cloverleaf model)
>WENV170015114	Arg	TCT
                   T      GCCC gccggtccgc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
      A G A        A      | | + | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     TGGTC
                    G + T
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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