The detailed information of tRNA gene sequence


Sequence ID>WENV170015145
Genome IDAZIE01003009
Search identical group
Phylum/Class[AZIE] marine sediment metagenome; sample MGS-MCh from oil contaminated site at the lagoon of Mar Chica, located in the north-west
Species
Start position on genome 24801
End posion on genome 24726
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttaaaggtta
tRNA gene sequence 
AGGAGGATAGTTCAATTGGTAGAGCAGTGGTCTTCAAAATCATCGGTTATGGGTTCAAGT
CCCGTTCCTCTTGTCA
Downstream region at tRNA end position 
tcgttttaat
Secondary structure (Cloverleaf model)
>WENV170015145	SeC	TCA
                   a      GTCA tcgttttaat
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T G
                    T     T G C C C     A
      T A A        A      | + | | |     A
    T       C T T G       A T G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     CGGTT
                    G + T
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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