The detailed information of tRNA gene sequence


Sequence ID>ENV08001963
Genome IDABOK01108496
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 22
End posion on genome 98
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcttctttgt
tRNA gene sequence 
CGGGGCATAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGAGGGTTCGAA
TCCTTCTGCCCCGACCA
Downstream region at tRNA end position 
ccgaatttaa
Secondary structure (Cloverleaf model)
>ENV08001963	Pro	TGG
                   t      ACCA ccgaatttaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C T T C C     A
      T G A        A      | | + | |     G
    C       C G C G       G A G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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