The detailed information of tRNA gene sequence


Sequence ID>WENV170015220
Genome IDAZIE01024953
Search identical group
Phylum/Class[AZIE] marine sediment metagenome; sample MGS-MCh from oil contaminated site at the lagoon of Mar Chica, located in the north-west
Species
Start position on genome 190
End posion on genome 283
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caccaaacat
tRNA gene sequence 
AGCGGAATGGCAGAGTCTGGTCTATTGCAGCGCTTTGCTAAAGCGCCGACGGCCTAACGG
CTGTCCGTAGGTTCGAATCCTACTTCCGCTGCCA
Downstream region at tRNA end position 
aattgagacg
Secondary structure (Cloverleaf model)
>WENV170015220	Ser	GCT
                   t      GCCA aattgagacg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A T C C     A
    C T G A        G      | | | | |     G
  T         G A C G       G T A G G     C
  G         + | | |                 T T
  G         T T G C
    T C T A        A     CGACGGCCTAACGGCTGTCC
                    G - C
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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