The detailed information of tRNA gene sequence


Sequence ID>WENV170015221
Genome IDAZIE01024953
Search identical group
Phylum/Class[AZIE] marine sediment metagenome; sample MGS-MCh from oil contaminated site at the lagoon of Mar Chica, located in the north-west
Species
Start position on genome 433
End posion on genome 508
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acaatttaaa
tRNA gene sequence 
GGGTCGATGGTGTAACTGGCAACATACCGGATTCCAAATCCGGCTGATCTAGGTTCGAAT
CCTAGTTGGCCCGCCA
Downstream region at tRNA end position 
aatgctgcac
Secondary structure (Cloverleaf model)
>WENV170015221	Trp	CCA
                   a      GCCA aatgctgcac
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G + T
                     A - T          T A
                    T     G A T C C     A
      C A A        G      | | | | |     G
    T       T G T G       C T A G G     C
    G       | | | +                 T T
    G       A C A T
      C A          A     CTGAT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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