The detailed information of tRNA gene sequence


Sequence ID>WENV170015246
Genome IDAZIF01000194
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 7476
End posion on genome 7402
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacgtaccac
tRNA gene sequence 
AGCGGGGTGGGGCAGCTAGGAGTGCCCGGCGGGCTCATAACCCGCAGGTCTGTGGTTCAA
ATCCACACCCCGCTAtac
Downstream region at tRNA end position 
aggcgttttt
Secondary structure (Cloverleaf model)
>WENV170015246	Met	CAT
                   c      Atac aggcgttttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     A C A C C     A
    T C G A        G      | | | | |     A
  A         C G G G       T G T G G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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