The detailed information of tRNA gene sequence


Sequence ID>WENV170015271
Genome IDAZIF01001798
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 2840
End posion on genome 2929
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caataaatta
tRNA gene sequence 
GCCGGGGTGGCGGAGCCAGGGCAAACGCGCCAGACTCGAGATCTGGTTGTGCACGGCACA
GCTAGGGTTCAAATCCCTACCCCGGCGCCT
Downstream region at tRNA end position 
ttcactttgt
Secondary structure (Cloverleaf model)
>WENV170015271	Ser	CGA
                   a      GCCT ttcactttgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     A T C C C     A
    C C G A        G      | | | | |     A
  A         G G C G       T A G G G     C
  G           | | |                 T T
  G         A C G C
    G C A A        G     TTGTGCACGGCACAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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