The detailed information of tRNA gene sequence


Sequence ID>ENV08001966
Genome IDABOK01119752
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 111
End posion on genome 28
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnnnT
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAA
GGTTCGAATCCTTCCCCCACCATat
Downstream region at tRNA end position 
acatggctat
Secondary structure (Cloverleaf model)
>ENV08001966	Tyr	GTA
                   T      ATat acatggctat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACAGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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