The detailed information of tRNA gene sequence


Sequence ID>WENV170015519
Genome IDAZIH01002610
Search identical group
Phylum/Class[AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port
Species
Start position on genome 945
End posion on genome 869
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagatttacc
tRNA gene sequence 
GGCAATGTAGCTCAGTTGGTTAGAGCAACGCATTCATAATGCGTGGGTCGCAGGTTCAAA
TCCCGCCATTGCCACCA
Downstream region at tRNA end position 
gtttactggg
Secondary structure (Cloverleaf model)
>WENV170015519	Met	CAT
                   c      ACCA gtttactggg
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | |   | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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