The detailed information of tRNA gene sequence


Sequence ID>WENV170015569
Genome IDAZIH01005366
Search identical group
Phylum/Class[AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port
Species
Start position on genome 1844
End posion on genome 1755
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcccccatc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGAGCGTGTGAGCGTT
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttgctctatt
Secondary structure (Cloverleaf model)
>WENV170015569	Ser	TGA
                   c      GCCA ttgctctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGCGTGTGAGCGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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