The detailed information of tRNA gene sequence


Sequence ID>WENV170015598
Genome IDAZIH01009299
Search identical group
Phylum/Class[AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port
Species
Start position on genome 464
End posion on genome 554
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atggaaaaac
tRNA gene sequence 
GGTGGGCTGGCAGAGTGGCCGAATGCAGCGGTCTTGAAAACCGCCGAAGGTTTGTAGCCT
TCCCGGGGTTCGAATCCCTGGCCCACCGCCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>WENV170015598	Ser	TGA
                   c      GCCA tttttnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        A     CGAAGGTTTGTAGCCTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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