The detailed information of tRNA gene sequence


Sequence ID>WENV170015672
Genome IDAZII01002428
Search identical group
Phylum/Class[AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte
Species
Start position on genome 565
End posion on genome 652
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgcattac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tattagcttc
Secondary structure (Cloverleaf model)
>WENV170015672	Ser	GGA
                   c      GCCA tattagcttc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAGTCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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