The detailed information of tRNA gene sequence


Sequence ID>WENV170015693
Genome IDAZII01003370
Search identical group
Phylum/Class[AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte
Species
Start position on genome 485
End posion on genome 398
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagcactat
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tctaatagtc
Secondary structure (Cloverleaf model)
>WENV170015693	Ser	GGA
                   t      GCCA tctaatagtc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAGTCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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