The detailed information of tRNA gene sequence


Sequence ID>WENV170015797
Genome IDAZII01009981
Search identical group
Phylum/Class[AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte
Species
Start position on genome 806
End posion on genome 895
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
accgcattcc
tRNA gene sequence
GGAGAGGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACGGGAAACTGTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position
tattagaaaa
Secondary structure (Cloverleaf model)
>WENV170015797	Ser	GCT
                   c      GCCA tattagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGGGAAACTGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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