Sequence ID | >ENV08001975 |
Genome ID | ABOK01148089 |
Phylum/Class | mosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA |
Species | |
Start position on genome
|
100
|
End posion on genome
|
25
|
Amino Acid
|
Val
|
Anticodon
|
TAC
|
Upstream region at tRNA start position
|
ccacaacagt
|
tRNA gene sequence
|
GGGTGATTAGCTCAGTTGGTAGAGCATCTCCTTTACACGGAGGGGGTCGGCGGTTCGAGC CCGTCATCACCCACCA
|
Downstream region at tRNA end position
|
ctgttatggg
|
Secondary structure (Cloverleaf model) | >ENV08001975 Val TAC
t ACCA ctgttatggg
G - C
G - C
G - C
T - A
G - C
A - T
T - A C G
T C T G C C A
T G A A | + | | | G
T C T C G G G C G G C
G | | | | T T
G G A G C
T A A GGGTC
T + G
C - G
T - A
C - G
C - G
T C
T A
T A C
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |