The detailed information of tRNA gene sequence


Sequence ID>WENV170016432
Genome IDAZIK01004787
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 2949
End posion on genome 3039
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaggttatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTAAACGTTAATAGCGT
TTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atataaaacc
Secondary structure (Cloverleaf model)
>WENV170016432	Ser	GGA
                   t      GCCA atataaaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAACGTTAATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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