The detailed information of tRNA gene sequence


Sequence ID>WENV170016440
Genome IDAZIK01005366
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 600
End posion on genome 689
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accgcccacc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCGCTCCGCCA
Downstream region at tRNA end position 
gacccccaaa
Secondary structure (Cloverleaf model)
>WENV170016440	Ser	GGA
                   c      GCCA gacccccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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