The detailed information of tRNA gene sequence


Sequence ID>WENV170016505
Genome IDAZIK01011013
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 709
End posion on genome 620
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgctccac
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGGAACCGTC
TCCAGGGTTCGAATCCCTGTCTGTCCGCCA
Downstream region at tRNA end position 
caatccccat
Secondary structure (Cloverleaf model)
>WENV170016505	Ser	GGA
                   c      GCCA caatccccat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGGAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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