The detailed information of tRNA gene sequence


Sequence ID>WENV170016700
Genome IDBARS01001676
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 575
End posion on genome 499
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaggacttc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGGCGGTTCGAG
TCCGTCCGGGCCTACTA
Downstream region at tRNA end position 
gacgatttca
Secondary structure (Cloverleaf model)
>WENV170016700	Met	CAT
                   c      ACTA gacgatttca
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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