The detailed information of tRNA gene sequence


Sequence ID>WENV170016767
Genome IDBARS01007800
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 21
End posion on genome 96
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaattatta
tRNA gene sequence 
AGGTCCGTAGCTCCAACGGCAGAGCACTGGACTCCAAATCCGGGGGTTGCAGGTTCAAAT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
tttttttgtt
Secondary structure (Cloverleaf model)
>WENV170016767	Trp	CCA
                   a      GCCA tttttttgtt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A C        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    T + G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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