The detailed information of tRNA gene sequence


Sequence ID>ENV08001979
Genome IDABOK01160356
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 37
End posion on genome 109
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gaacgaatga
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTAGAGCATCTCCTTTACACGGAGGGGGTCGGCGGTTCGAGC
CCGTCATCACCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001979	Val	TAC
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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