The detailed information of tRNA gene sequence


Sequence ID>WENV170017030
Genome IDBARS01042814
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 674
End posion on genome 750
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgggcaaa
tRNA gene sequence 
GGGGCGGTAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTCGGTCGCGGGTTCGAG
CCCCGCCCGCCCCACTA
Downstream region at tRNA end position 
ccagnnnnnn
Secondary structure (Cloverleaf model)
>WENV170017030	Met	CAT
                   a      ACTA ccagnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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