The detailed information of tRNA gene sequence


Sequence ID>ENV08001982
Genome IDABOK01169651
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 108
End posion on genome 22
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGTCCTAGTGGTGGTAACACTGTG
GAGGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
gcagttttct
Secondary structure (Cloverleaf model)
>ENV08001982	Leu	CAG
                   t      ACCA gcagttttct
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTGGTAACACTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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