The detailed information of tRNA gene sequence


Sequence ID>WENV170017185
Genome IDBART01000579
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1505
End posion on genome 1580
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttggctaac
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGCAGAGCAACCGGCTCATAACCGGTCGGTCCCTGGTTCGAAT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aaaaatagat
Secondary structure (Cloverleaf model)
>WENV170017185	Met	CAT
                   c      ACCA aaaaatagat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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