The detailed information of tRNA gene sequence


Sequence ID>WENV170017196
Genome IDBART01000925
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 283
End posion on genome 190
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagcaaaat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGTCGCCTGCTAAGCGATTAAGTGCCCATAAAGG
TGCTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttaggggc
Secondary structure (Cloverleaf model)
>WENV170017196	Ser	GCT
                   t      GCCA gtttaggggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGTGCCCATAAAGGTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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