The detailed information of tRNA gene sequence


Sequence ID>WENV170017204
Genome IDBART01001239
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 352
End posion on genome 429
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttatatcttt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAAGCGCGCTTGGTTCGGGACCAAGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
taatagcttt
Secondary structure (Cloverleaf model)
>WENV170017204	Pro	CGG
                   t      ACCA taatagcttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T A A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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