The detailed information of tRNA gene sequence


Sequence ID>WENV170017236
Genome IDBART01003063
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 376
End posion on genome 452
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttgtgttttt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGAAGCGCGCTTGGTTCGGGATCAAGAGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttaaaaaat
Secondary structure (Cloverleaf model)
>WENV170017236	Pro	CGG
                   t      ACCA tttaaaaaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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