The detailed information of tRNA gene sequence


Sequence ID>WENV170017272
Genome IDBART01006538
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1468
End posion on genome 1540
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcactctaa
tRNA gene sequence 
GGGCTCGTAGCTCAGCGGCAGAGCGGGCGGCTCATAACCGTCTGGTCGCAGGTTCGAATC
CTGCCGAGCCCACtt
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170017272	Met	CAT
                   a      ACtt nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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