The detailed information of tRNA gene sequence


Sequence ID>WENV170017275
Genome IDBART01006651
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1400
End posion on genome 1475
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
caaaataatt
tRNA gene sequence 
GCGGGAATAGCTCAGGCGGTAGAGCGTTGGCTTCCCAAGCCAAAGGTCGCGGGTTCGAAC
CCCGTTTCCCGCTCCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV170017275	Gly	CCC
                   t      TCCA ttttttttat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C A
                    T     T G C C C     A
      G G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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