The detailed information of tRNA gene sequence


Sequence ID>WENV170017371
Genome IDBART01021555
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 677
End posion on genome 601
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttaaaagc
tRNA gene sequence 
GGAGCTGTCGTCTAGTGGTTTAGGACACATGCCTGTCACGCATGAGATCGCGGGTTCGAA
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
gttaatatca
Secondary structure (Cloverleaf model)
>WENV170017371	Asp	GTC
                   c      GCCA gttaatatca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        C      + | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    T       G G A C
      T T A        A     AGATC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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