The detailed information of tRNA gene sequence


Sequence ID>WENV170017417
Genome IDBART01027079
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 654
End posion on genome 579
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cttaagttgt
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATC
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
aattttttta
Secondary structure (Cloverleaf model)
>WENV170017417	Ala	TGC
                   t      ACCA aattttttta
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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