The detailed information of tRNA gene sequence


Sequence ID>WENV170017479
Genome IDBART01032350
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 225
End posion on genome 301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctcatcga
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCAGCGCACTCATAATGCGGAGGTCCCAGGTTCAAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>WENV170017479	Met	CAT
                   a      ACCA tttattttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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