The detailed information of tRNA gene sequence


Sequence ID>WENV170017506
Genome IDBART01034340
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 249
End posion on genome 335
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aaaataataa
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGTAGACGCGCTACGTTCAGGGCGTAGTAGGTGTATGCCTGTG
GGGGTTCAAATCCCCCCTTCGGCACCA
Downstream region at tRNA end position 
ttttattaat
Secondary structure (Cloverleaf model)
>WENV170017506	Leu	CAG
                   a      ACCA ttttattaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C C C C     A
      C A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGGTGTATGCCTGT
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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