The detailed information of tRNA gene sequence


Sequence ID>ENV08001987
Genome IDABOK01204100
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 14
End posion on genome 88
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atcgaggttt
tRNA gene sequence 
GGGCCTATAGCTCAGTCGGTTAGAGCGCCGCCCTGATAAGGCGGAGGTCACTGGTTCAAG
TCCAGTTAGGCCCACag
Downstream region at tRNA end position 
tgcgaaccct
Secondary structure (Cloverleaf model)
>ENV08001987	Ile	GAT
                   t      ACag tgcgaaccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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