The detailed information of tRNA gene sequence


Sequence ID>WENV170017596
Genome IDBARU01002948
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 201
End posion on genome 294
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagtaaaat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGTCGCCTGCTAAGCGATTAAGTGCCCATAAAGG
TGCTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcttaggggc
Secondary structure (Cloverleaf model)
>WENV170017596	Ser	GCT
                   t      GCCA gcttaggggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGTGCCCATAAAGGTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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