The detailed information of tRNA gene sequence


Sequence ID>WENV170017669
Genome IDBARU01010922
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 433
End posion on genome 358
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caattgtaaa
tRNA gene sequence 
GGGCTTATGGTCTAGTGGTTATGACGTCGCCTTCACATGGCGGAGGTCGCCGGTTCAAAT
CCGGCTAAGCCCATCA
Downstream region at tRNA end position 
aatccaacag
Secondary structure (Cloverleaf model)
>WENV170017669	Val	CAC
                   a      ATCA aatccaacag
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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