The detailed information of tRNA gene sequence


Sequence ID>WENV170017825
Genome IDBARU01030078
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 539
End posion on genome 614
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tataaaaaat
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGCAGAGCACCTGCTTCACATGTAGGGGGTCACAGGTTCAAGT
CCTGTTCCGCCTACCA
Downstream region at tRNA end position 
tttttttaag
Secondary structure (Cloverleaf model)
>WENV170017825	Val	CAC
                   t      ACCA tttttttaag
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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