The detailed information of tRNA gene sequence


Sequence ID>ENV08001990
Genome IDABOK01217516
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 27
End posion on genome 104
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aggaaaagat
tRNA gene sequence 
GCGTCCGTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGGTGGGGGTCGGTGGTTCGA
GTCCACTCGGACGCACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001990	Val	GAC
                   t      ACCA aannnnnnnn
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGGTC
                    C - G
                    C   T
                    A   G
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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