The detailed information of tRNA gene sequence


Sequence ID>WENV170017886
Genome IDBARU01038183
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 11
End posion on genome 86
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaagatttgt
tRNA gene sequence 
GGGGCTGTAGTTCAATCGGGAGAACGTTTGACTGGCAGTCAAAAGGTAGGGGGTTCGAAT
CCCCCCAGCTCCACCA
Downstream region at tRNA end position 
acaaagcaaa
Secondary structure (Cloverleaf model)
>WENV170017886	Ala	GGC
                   t      ACCA acaaagcaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
      T A A        A      | | | | |     G
    C       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     AGGTA
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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