The detailed information of tRNA gene sequence


Sequence ID>WENV170017961
Genome IDBARV01001425
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1324
End posion on genome 1252
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tagcaattat
tRNA gene sequence 
GGCGGTGTAGCCAAGAGGTTAAGGCAGGGGTCTGCAAAACCCCGATACAGCGGTTCGAAT
CCGCTCGCCGCCTttt
Downstream region at tRNA end position 
tgctttgccg
Secondary structure (Cloverleaf model)
>WENV170017961	Cys	GCA
                   t      Tttt tgctttgccg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C G C C     A
      A G A        A      | | | | |     G
    G       A C C G       A G C G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     GATAC
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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